Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.36□□□□□ -0.27
Col6a2Q02788 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.36□□□□□ -0.27
Col6a2Q02788 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.36□□□□□ -0.27
Col6a2Q02788 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.36□□□□□ -0.27
Col6a2Q02788 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.36□□□□□ -0.27
Col6a2Q02788 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Col6a2Q02788 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col6a2Q02788 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a2Q02788 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a2Q02788 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col6a2Q02788 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a2Q02788 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a2Q02788 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col6a2Q02788 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.35□□□□□ -0.27
Col6a2Q02788 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Col6a2Q02788 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a2Q02788 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a2Q02788 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a2Q02788 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col6a2Q02788 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col6a2Q02788 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.35□□□□□ -0.27
Col6a2Q02788 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a2Q02788 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.35□□□□□ -0.27
Col6a2Q02788 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.35□□□□□ -0.27
Col6a2Q02788 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.35□□□□□ -0.27
Col6a2Q02788 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Col6a2Q02788 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.35□□□□□ -0.27
Col6a2Q02788 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.35□□□□□ -0.27
Col6a2Q02788 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.35□□□□□ -0.27
Col6a2Q02788 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col6a2Q02788 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a2Q02788 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a2Q02788 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a2Q02788 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col6a2Q02788 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.35□□□□□ -0.27
Col6a2Q02788 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a2Q02788 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a2Q02788 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a2Q02788 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Col6a2Q02788 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a2Q02788 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a2Q02788 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a2Q02788 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a2Q02788 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.34□□□□□ -0.27
Col6a2Q02788 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col6a2Q02788 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.34□□□□□ -0.27
Col6a2Q02788 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Col6a2Q02788 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.34□□□□□ -0.27
Col6a2Q02788 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.34□□□□□ -0.27
Col6a2Q02788 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.34□□□□□ -0.27
Col6a2Q02788 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Col6a2Q02788 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.34□□□□□ -0.27
Col6a2Q02788 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC13.34□□□□□ -0.27
Col6a2Q02788 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.34□□□□□ -0.27
Col6a2Q02788 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.34□□□□□ -0.27
Col6a2Q02788 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.34□□□□□ -0.27
Col6a2Q02788 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col6a2Q02788 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Col6a2Q02788 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col6a2Q02788 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a2Q02788 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a2Q02788 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms