Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.29□□□□□ -0.12
VcpQ01853 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VcpQ01853 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
VcpQ01853 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VcpQ01853 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.29□□□□□ -0.12
VcpQ01853 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.29□□□□□ -0.12
VcpQ01853 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.29□□□□□ -0.12
VcpQ01853 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
VcpQ01853 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VcpQ01853 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VcpQ01853 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
VcpQ01853 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VcpQ01853 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VcpQ01853 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcpQ01853 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.28□□□□□ -0.12
VcpQ01853 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.28□□□□□ -0.12
VcpQ01853 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcpQ01853 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcpQ01853 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcpQ01853 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.28□□□□□ -0.12
VcpQ01853 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcpQ01853 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
VcpQ01853 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VcpQ01853 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VcpQ01853 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.28□□□□□ -0.12
VcpQ01853 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VcpQ01853 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VcpQ01853 Gm4857-201ENSMUST00000192718 785 ntBASIC14.28□□□□□ -0.12
VcpQ01853 Gm18054-201ENSMUST00000207539 555 ntBASIC14.28□□□□□ -0.12
VcpQ01853 Gm8463-201ENSMUST00000208573 613 ntBASIC14.28□□□□□ -0.12
VcpQ01853 Gm6013-201ENSMUST00000212264 699 ntBASIC14.28□□□□□ -0.12
VcpQ01853 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.28□□□□□ -0.12
VcpQ01853 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcpQ01853 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcpQ01853 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcpQ01853 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
VcpQ01853 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VcpQ01853 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcpQ01853 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VcpQ01853 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcpQ01853 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcpQ01853 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.28□□□□□ -0.12
VcpQ01853 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcpQ01853 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VcpQ01853 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcpQ01853 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VcpQ01853 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VcpQ01853 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VcpQ01853 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VcpQ01853 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VcpQ01853 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VcpQ01853 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
VcpQ01853 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
VcpQ01853 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.27□□□□□ -0.12
VcpQ01853 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VcpQ01853 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.27□□□□□ -0.12
VcpQ01853 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.27□□□□□ -0.12
VcpQ01853 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.27□□□□□ -0.12
VcpQ01853 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VcpQ01853 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VcpQ01853 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VcpQ01853 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VcpQ01853 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
VcpQ01853 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.27□□□□□ -0.13
VcpQ01853 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.27□□□□□ -0.13
VcpQ01853 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VcpQ01853 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
VcpQ01853 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VcpQ01853 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VcpQ01853 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
VcpQ01853 Gm7584-201ENSMUST00000175829 940 ntBASIC14.27□□□□□ -0.13
VcpQ01853 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VcpQ01853 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.27□□□□□ -0.13
VcpQ01853 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VcpQ01853 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
VcpQ01853 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.27□□□□□ -0.13
VcpQ01853 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VcpQ01853 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
VcpQ01853 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
VcpQ01853 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.27□□□□□ -0.13
VcpQ01853 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.27□□□□□ -0.13
VcpQ01853 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VcpQ01853 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
VcpQ01853 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VcpQ01853 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.27□□□□□ -0.13
VcpQ01853 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
VcpQ01853 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.27□□□□□ -0.13
VcpQ01853 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.27□□□□□ -0.13
VcpQ01853 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VcpQ01853 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VcpQ01853 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
VcpQ01853 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VcpQ01853 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VcpQ01853 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VcpQ01853 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
VcpQ01853 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VcpQ01853 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VcpQ01853 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VcpQ01853 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
VcpQ01853 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms