Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Npas1P97459 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.22□□□□□ -0.61
Npas1P97459 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.22□□□□□ -0.61
Npas1P97459 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.22□□□□□ -0.61
Npas1P97459 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Npas1P97459 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Npas1P97459 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.22□□□□□ -0.61
Npas1P97459 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.22□□□□□ -0.61
Npas1P97459 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.22□□□□□ -0.61
Npas1P97459 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.22□□□□□ -0.61
Npas1P97459 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Npas1P97459 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Npas1P97459 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Npas1P97459 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Npas1P97459 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.21□□□□□ -0.61
Npas1P97459 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.21□□□□□ -0.61
Npas1P97459 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npas1P97459 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npas1P97459 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npas1P97459 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npas1P97459 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npas1P97459 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npas1P97459 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npas1P97459 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npas1P97459 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npas1P97459 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npas1P97459 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npas1P97459 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npas1P97459 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.21□□□□□ -0.61
Npas1P97459 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npas1P97459 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Npas1P97459 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npas1P97459 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.21□□□□□ -0.61
Npas1P97459 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Npas1P97459 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Npas1P97459 Gm15427-201ENSMUST00000117288 531 ntBASIC11.21□□□□□ -0.61
Npas1P97459 Gm15957-201ENSMUST00000118893 974 ntBASIC11.21□□□□□ -0.61
Npas1P97459 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.21□□□□□ -0.61
Npas1P97459 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.21□□□□□ -0.61
Npas1P97459 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Npas1P97459 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npas1P97459 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.21□□□□□ -0.61
Npas1P97459 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.21□□□□□ -0.61
Npas1P97459 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.21□□□□□ -0.61
Npas1P97459 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npas1P97459 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Npas1P97459 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Npas1P97459 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Npas1P97459 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Npas1P97459 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Npas1P97459 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Npas1P97459 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Npas1P97459 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Npas1P97459 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.62
Npas1P97459 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Npas1P97459 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Npas1P97459 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
Npas1P97459 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Npas1P97459 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Npas1P97459 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.2□□□□□ -0.62
Npas1P97459 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.2□□□□□ -0.62
Npas1P97459 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Npas1P97459 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Npas1P97459 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Npas1P97459 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Npas1P97459 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Npas1P97459 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Npas1P97459 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.2□□□□□ -0.62
Npas1P97459 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Npas1P97459 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Npas1P97459 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Npas1P97459 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Npas1P97459 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.2□□□□□ -0.62
Npas1P97459 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Npas1P97459 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Npas1P97459 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.2□□□□□ -0.62
Npas1P97459 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.2□□□□□ -0.62
Npas1P97459 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.2□□□□□ -0.62
Npas1P97459 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Npas1P97459 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms