Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.55□□□□□ -0.08
Trim43cP86449 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.55□□□□□ -0.08
Trim43cP86449 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim43cP86449 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trim43cP86449 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.55□□□□□ -0.08
Trim43cP86449 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.55□□□□□ -0.08
Trim43cP86449 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.55□□□□□ -0.08
Trim43cP86449 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Trim43cP86449 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43cP86449 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim43cP86449 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.54□□□□□ -0.08
Trim43cP86449 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.54□□□□□ -0.08
Trim43cP86449 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Trim43cP86449 Gm27701-201ENSMUST00000184498 110 ntBASIC14.54□□□□□ -0.08
Trim43cP86449 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.54□□□□□ -0.08
Trim43cP86449 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.54□□□□□ -0.08
Trim43cP86449 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.54□□□□□ -0.08
Trim43cP86449 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Trim43cP86449 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Trim43cP86449 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43cP86449 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim43cP86449 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim43cP86449 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim43cP86449 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.53□□□□□ -0.08
Trim43cP86449 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.53□□□□□ -0.08
Trim43cP86449 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.53□□□□□ -0.08
Trim43cP86449 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.53□□□□□ -0.08
Trim43cP86449 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.53□□□□□ -0.08
Trim43cP86449 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Trim43cP86449 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim43cP86449 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.53□□□□□ -0.08
Trim43cP86449 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.53□□□□□ -0.08
Trim43cP86449 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trim43cP86449 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.53□□□□□ -0.08
Trim43cP86449 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.53□□□□□ -0.08
Trim43cP86449 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim43cP86449 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.53□□□□□ -0.08
Trim43cP86449 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 Acot6-202ENSMUST00000222921 3622 ntBASIC14.53□□□□□ -0.08
Trim43cP86449 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim43cP86449 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim43cP86449 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43cP86449 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms