Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.6□□□□□ -0.55
Atf1P81269 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atf1P81269 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.59□□□□□ -0.55
Atf1P81269 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.59□□□□□ -0.55
Atf1P81269 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Atf1P81269 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Atf1P81269 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.59□□□□□ -0.55
Atf1P81269 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.59□□□□□ -0.55
Atf1P81269 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.59□□□□□ -0.55
Atf1P81269 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Atf1P81269 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.59□□□□□ -0.55
Atf1P81269 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.59□□□□□ -0.55
Atf1P81269 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.59□□□□□ -0.55
Atf1P81269 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Atf1P81269 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.59□□□□□ -0.55
Atf1P81269 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.59□□□□□ -0.55
Atf1P81269 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Gm24447-201ENSMUST00000083977 338 ntBASIC11.59□□□□□ -0.55
Atf1P81269 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.59□□□□□ -0.55
Atf1P81269 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Atf1P81269 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Atf1P81269 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf1P81269 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Atf1P81269 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Atf1P81269 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.58□□□□□ -0.56
Atf1P81269 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Atf1P81269 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.58□□□□□ -0.56
Atf1P81269 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.58□□□□□ -0.56
Atf1P81269 Gm21854-201ENSMUST00000179901 471 ntBASIC11.58□□□□□ -0.56
Atf1P81269 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.58□□□□□ -0.56
Atf1P81269 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.58□□□□□ -0.56
Atf1P81269 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.58□□□□□ -0.56
Atf1P81269 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.58□□□□□ -0.56
Atf1P81269 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Atf1P81269 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.58□□□□□ -0.56
Atf1P81269 Gm20445-201ENSMUST00000061905 565 ntBASIC11.58□□□□□ -0.56
Atf1P81269 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Syt7-205ENSMUST00000224135 1557 ntBASIC11.58□□□□□ -0.56
Atf1P81269 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Atf1P81269 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Atf1P81269 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Atf1P81269 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.58□□□□□ -0.56
Atf1P81269 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atf1P81269 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms