Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubgcp3P58854 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubgcp3P58854 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubgcp3P58854 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Tubgcp3P58854 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Tubgcp3P58854 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tubgcp3P58854 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Tubgcp3P58854 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubgcp3P58854 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubgcp3P58854 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubgcp3P58854 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubgcp3P58854 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Tubgcp3P58854 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubgcp3P58854 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.67□□□□□ -0.22
Tubgcp3P58854 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Tubgcp3P58854 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Gm12485-201ENSMUST00000119641 291 ntBASIC13.67□□□□□ -0.22
Tubgcp3P58854 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.67□□□□□ -0.22
Tubgcp3P58854 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.67□□□□□ -0.22
Tubgcp3P58854 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.67□□□□□ -0.22
Tubgcp3P58854 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tubgcp3P58854 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.66□□□□□ -0.22
Tubgcp3P58854 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Tubgcp3P58854 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Tubgcp3P58854 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Gm16215-201ENSMUST00000161990 637 ntBASIC13.66□□□□□ -0.22
Tubgcp3P58854 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.66□□□□□ -0.22
Tubgcp3P58854 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Gm18041-201ENSMUST00000218210 618 ntBASIC13.66□□□□□ -0.22
Tubgcp3P58854 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Gm24447-201ENSMUST00000083977 338 ntBASIC13.66□□□□□ -0.22
Tubgcp3P58854 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tubgcp3P58854 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.65□□□□□ -0.22
Tubgcp3P58854 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.65□□□□□ -0.22
Tubgcp3P58854 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Tubgcp3P58854 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms