Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp20P57748 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp20P57748 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp20P57748 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp20P57748 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.22■□□□□ 0.03
Mmp20P57748 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp20P57748 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp20P57748 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp20P57748 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp20P57748 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Mmp20P57748 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.22■□□□□ 0.03
Mmp20P57748 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp20P57748 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.22■□□□□ 0.03
Mmp20P57748 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp20P57748 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp20P57748 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.21■□□□□ 0.03
Mmp20P57748 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp20P57748 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.21■□□□□ 0.03
Mmp20P57748 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.21■□□□□ 0.03
Mmp20P57748 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp20P57748 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC15.21■□□□□ 0.03
Mmp20P57748 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp20P57748 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp20P57748 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp20P57748 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp20P57748 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.21■□□□□ 0.03
Mmp20P57748 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp20P57748 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp20P57748 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Mmp20P57748 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp20P57748 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp20P57748 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Mmp20P57748 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.21■□□□□ 0.03
Mmp20P57748 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.21■□□□□ 0.03
Mmp20P57748 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.21■□□□□ 0.03
Mmp20P57748 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Mmp20P57748 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.21■□□□□ 0.03
Mmp20P57748 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.21■□□□□ 0.03
Mmp20P57748 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.21■□□□□ 0.03
Mmp20P57748 Gm7293-201ENSMUST00000216682 1007 ntBASIC15.21■□□□□ 0.03
Mmp20P57748 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp20P57748 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp20P57748 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp20P57748 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp20P57748 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp20P57748 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Mmp20P57748 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.21■□□□□ 0.03
Mmp20P57748 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp20P57748 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Mmp20P57748 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Mmp20P57748 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Mmp20P57748 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Mmp20P57748 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.2■□□□□ 0.02
Mmp20P57748 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Mmp20P57748 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Mmp20P57748 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Mmp20P57748 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Mmp20P57748 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Mmp20P57748 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Mmp20P57748 Gm24830-201ENSMUST00000102024 166 ntBASIC15.2■□□□□ 0.02
Mmp20P57748 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.2■□□□□ 0.02
Mmp20P57748 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC15.2■□□□□ 0.02
Mmp20P57748 Mir3547-201ENSMUST00000175461 88 ntBASIC15.2■□□□□ 0.02
Mmp20P57748 Gm25890-201ENSMUST00000177643 165 ntBASIC15.2■□□□□ 0.02
Mmp20P57748 Rnu1b2-201ENSMUST00000178073 165 ntBASIC15.2■□□□□ 0.02
Mmp20P57748 Rnu1b1-201ENSMUST00000178250 165 ntBASIC15.2■□□□□ 0.02
Mmp20P57748 Gm22614-201ENSMUST00000178300 165 ntBASIC15.2■□□□□ 0.02
Mmp20P57748 Gm16505-201ENSMUST00000179981 232 ntBASIC15.2■□□□□ 0.02
Mmp20P57748 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC15.2■□□□□ 0.02
Mmp20P57748 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC15.2■□□□□ 0.02
Mmp20P57748 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC15.2■□□□□ 0.02
Mmp20P57748 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 Gm22042-201ENSMUST00000082989 165 ntBASIC15.2■□□□□ 0.02
Mmp20P57748 Gm26232-201ENSMUST00000083360 166 ntBASIC15.2■□□□□ 0.02
Mmp20P57748 Gm24136-201ENSMUST00000083374 165 ntBASIC15.2■□□□□ 0.02
Mmp20P57748 Rnu1b6-201ENSMUST00000083839 166 ntBASIC15.2■□□□□ 0.02
Mmp20P57748 Gm26110-201ENSMUST00000083971 165 ntBASIC15.2■□□□□ 0.02
Mmp20P57748 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Mmp20P57748 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp20P57748 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms