Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh5P55284 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cdh5P55284 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cdh5P55284 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh5P55284 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh5P55284 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh5P55284 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh5P55284 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh5P55284 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh5P55284 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cdh5P55284 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cdh5P55284 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.07□□□□□ -0.32
Cdh5P55284 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.07□□□□□ -0.32
Cdh5P55284 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh5P55284 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
Cdh5P55284 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.07□□□□□ -0.32
Cdh5P55284 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh5P55284 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh5P55284 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh5P55284 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.07□□□□□ -0.32
Cdh5P55284 Gm29667-201ENSMUST00000190817 490 ntBASIC13.07□□□□□ -0.32
Cdh5P55284 Gm33320-201ENSMUST00000192232 530 ntBASIC13.07□□□□□ -0.32
Cdh5P55284 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.07□□□□□ -0.32
Cdh5P55284 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh5P55284 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.07□□□□□ -0.32
Cdh5P55284 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.07□□□□□ -0.32
Cdh5P55284 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh5P55284 Gm20445-201ENSMUST00000061905 565 ntBASIC13.07□□□□□ -0.32
Cdh5P55284 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh5P55284 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.07□□□□□ -0.32
Cdh5P55284 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh5P55284 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.07□□□□□ -0.32
Cdh5P55284 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh5P55284 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh5P55284 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.07□□□□□ -0.32
Cdh5P55284 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cdh5P55284 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cdh5P55284 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh5P55284 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh5P55284 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.07□□□□□ -0.32
Cdh5P55284 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdh5P55284 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdh5P55284 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Cdh5P55284 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.06□□□□□ -0.32
Cdh5P55284 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Cdh5P55284 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.06□□□□□ -0.32
Cdh5P55284 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.06□□□□□ -0.32
Cdh5P55284 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.06□□□□□ -0.32
Cdh5P55284 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.06□□□□□ -0.32
Cdh5P55284 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh5P55284 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh5P55284 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh5P55284 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh5P55284 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.05□□□□□ -0.32
Cdh5P55284 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh5P55284 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh5P55284 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh5P55284 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh5P55284 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh5P55284 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Cdh5P55284 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh5P55284 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh5P55284 Gm15321-201ENSMUST00000121290 288 ntBASIC13.05□□□□□ -0.32
Cdh5P55284 Gm12882-201ENSMUST00000121696 517 ntBASIC13.05□□□□□ -0.32
Cdh5P55284 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Cdh5P55284 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh5P55284 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cdh5P55284 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cdh5P55284 Gm6218-201ENSMUST00000219812 628 ntBASIC13.05□□□□□ -0.32
Cdh5P55284 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh5P55284 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cdh5P55284 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.05□□□□□ -0.32
Cdh5P55284 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.05□□□□□ -0.32
Cdh5P55284 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh5P55284 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.05□□□□□ -0.32
Cdh5P55284 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh5P55284 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh5P55284 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cdh5P55284 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms