Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
NrlP54846 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.23□□□□□ -0.13
NrlP54846 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
NrlP54846 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.23□□□□□ -0.13
NrlP54846 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.23□□□□□ -0.13
NrlP54846 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Gm27516-201ENSMUST00000184237 98 ntBASIC14.23□□□□□ -0.13
NrlP54846 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.23□□□□□ -0.13
NrlP54846 Gm43118-201ENSMUST00000199149 775 ntBASIC14.23□□□□□ -0.13
NrlP54846 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.23□□□□□ -0.13
NrlP54846 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NrlP54846 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.23□□□□□ -0.13
NrlP54846 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Matn2-206ENSMUST00000228570 2798 ntBASIC14.23□□□□□ -0.13
NrlP54846 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.23□□□□□ -0.13
NrlP54846 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NrlP54846 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NrlP54846 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
NrlP54846 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.22□□□□□ -0.13
NrlP54846 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.22□□□□□ -0.13
NrlP54846 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.22□□□□□ -0.13
NrlP54846 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.22□□□□□ -0.13
NrlP54846 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.22□□□□□ -0.13
NrlP54846 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.22□□□□□ -0.13
NrlP54846 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.22□□□□□ -0.13
NrlP54846 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.22□□□□□ -0.13
NrlP54846 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.22□□□□□ -0.13
NrlP54846 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.22□□□□□ -0.13
NrlP54846 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.22□□□□□ -0.13
NrlP54846 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NrlP54846 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.22□□□□□ -0.13
NrlP54846 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NrlP54846 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NrlP54846 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NrlP54846 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
NrlP54846 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NrlP54846 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NrlP54846 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NrlP54846 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NrlP54846 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NrlP54846 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.21□□□□□ -0.13
NrlP54846 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NrlP54846 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.21□□□□□ -0.13
NrlP54846 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NrlP54846 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.21□□□□□ -0.13
NrlP54846 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NrlP54846 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NrlP54846 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
NrlP54846 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NrlP54846 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.21□□□□□ -0.13
NrlP54846 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.21□□□□□ -0.13
NrlP54846 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.21□□□□□ -0.13
NrlP54846 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NrlP54846 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.21□□□□□ -0.13
NrlP54846 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NrlP54846 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.21□□□□□ -0.13
NrlP54846 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NrlP54846 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms