Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nub1P54729 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nub1P54729 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nub1P54729 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nub1P54729 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nub1P54729 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nub1P54729 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nub1P54729 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nub1P54729 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nub1P54729 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nub1P54729 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.42□□□□□ -0.1
Nub1P54729 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nub1P54729 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nub1P54729 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nub1P54729 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Nub1P54729 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.42□□□□□ -0.1
Nub1P54729 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.42□□□□□ -0.1
Nub1P54729 Gm23984-201ENSMUST00000157139 203 ntBASIC14.42□□□□□ -0.1
Nub1P54729 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nub1P54729 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nub1P54729 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nub1P54729 Gm29608-201ENSMUST00000190444 463 ntBASIC14.42□□□□□ -0.1
Nub1P54729 Gm18018-201ENSMUST00000198273 408 ntBASIC14.42□□□□□ -0.1
Nub1P54729 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nub1P54729 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nub1P54729 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nub1P54729 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nub1P54729 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nub1P54729 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nub1P54729 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nub1P54729 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nub1P54729 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nub1P54729 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nub1P54729 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.42□□□□□ -0.1
Nub1P54729 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.41□□□□□ -0.1
Nub1P54729 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nub1P54729 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Nub1P54729 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.41□□□□□ -0.1
Nub1P54729 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.41□□□□□ -0.1
Nub1P54729 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.41□□□□□ -0.1
Nub1P54729 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.41□□□□□ -0.1
Nub1P54729 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nub1P54729 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
Nub1P54729 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nub1P54729 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.41□□□□□ -0.1
Nub1P54729 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.41□□□□□ -0.1
Nub1P54729 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Nub1P54729 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Nub1P54729 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nub1P54729 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nub1P54729 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nub1P54729 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nub1P54729 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nub1P54729 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.4□□□□□ -0.1
Nub1P54729 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nub1P54729 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nub1P54729 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Nub1P54729 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nub1P54729 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nub1P54729 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.4□□□□□ -0.1
Nub1P54729 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.4□□□□□ -0.1
Nub1P54729 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.4□□□□□ -0.1
Nub1P54729 Gm12091-201ENSMUST00000146791 830 ntBASIC14.4□□□□□ -0.1
Nub1P54729 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.4□□□□□ -0.1
Nub1P54729 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nub1P54729 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nub1P54729 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.4□□□□□ -0.1
Nub1P54729 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms