Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Sox1P53783 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Sox1P53783 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.61□□□□□ -0.23
Sox1P53783 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Gm17040-202ENSMUST00000170597 889 ntBASIC13.61□□□□□ -0.23
Sox1P53783 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.61□□□□□ -0.23
Sox1P53783 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Sox1P53783 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sox1P53783 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox1P53783 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.61□□□□□ -0.23
Sox1P53783 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sox1P53783 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sox1P53783 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Sox1P53783 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sox1P53783 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.6□□□□□ -0.23
Sox1P53783 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Sox1P53783 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sox1P53783 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sox1P53783 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Sox1P53783 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Gm15770-201ENSMUST00000117498 584 ntBASIC13.6□□□□□ -0.23
Sox1P53783 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sox1P53783 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.6□□□□□ -0.23
Sox1P53783 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Gm24749-201ENSMUST00000157838 343 ntBASIC13.6□□□□□ -0.23
Sox1P53783 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sox1P53783 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.6□□□□□ -0.23
Sox1P53783 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.6□□□□□ -0.23
Sox1P53783 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.6□□□□□ -0.23
Sox1P53783 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.6□□□□□ -0.23
Sox1P53783 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.6□□□□□ -0.23
Sox1P53783 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Sox1P53783 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
Sox1P53783 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.6□□□□□ -0.23
Sox1P53783 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Sox1P53783 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Sox1P53783 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox1P53783 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox1P53783 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox1P53783 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.59□□□□□ -0.23
Sox1P53783 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox1P53783 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sox1P53783 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox1P53783 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox1P53783 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox1P53783 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox1P53783 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sox1P53783 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox1P53783 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.59□□□□□ -0.23
Sox1P53783 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sox1P53783 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox1P53783 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sox1P53783 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox1P53783 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox1P53783 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sox1P53783 Gm25880-201ENSMUST00000104331 132 ntBASIC13.59□□□□□ -0.23
Sox1P53783 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.59□□□□□ -0.23
Sox1P53783 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Sox1P53783 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.59□□□□□ -0.23
Sox1P53783 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.59□□□□□ -0.23
Sox1P53783 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox1P53783 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox1P53783 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.59□□□□□ -0.23
Sox1P53783 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox1P53783 Gm18734-201ENSMUST00000172937 808 ntBASIC13.59□□□□□ -0.23
Sox1P53783 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sox1P53783 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.59□□□□□ -0.23
Sox1P53783 Gm3096-201ENSMUST00000185770 364 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms