Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RoraP51448 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RoraP51448 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RoraP51448 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RoraP51448 Gm24644-201ENSMUST00000157114 139 ntBASIC12.67□□□□□ -0.38
RoraP51448 Snora78-201ENSMUST00000158630 128 ntBASIC12.67□□□□□ -0.38
RoraP51448 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RoraP51448 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.67□□□□□ -0.38
RoraP51448 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.67□□□□□ -0.38
RoraP51448 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.67□□□□□ -0.38
RoraP51448 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.67□□□□□ -0.38
RoraP51448 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.67□□□□□ -0.38
RoraP51448 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.67□□□□□ -0.38
RoraP51448 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RoraP51448 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RoraP51448 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RoraP51448 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RoraP51448 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RoraP51448 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RoraP51448 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RoraP51448 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RoraP51448 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RoraP51448 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RoraP51448 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RoraP51448 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.67□□□□□ -0.38
RoraP51448 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RoraP51448 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RoraP51448 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RoraP51448 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.67□□□□□ -0.38
RoraP51448 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.67□□□□□ -0.38
RoraP51448 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RoraP51448 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.67□□□□□ -0.38
RoraP51448 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RoraP51448 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RoraP51448 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.66□□□□□ -0.38
RoraP51448 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RoraP51448 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RoraP51448 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RoraP51448 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RoraP51448 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
RoraP51448 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RoraP51448 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RoraP51448 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RoraP51448 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RoraP51448 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RoraP51448 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
RoraP51448 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RoraP51448 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.66□□□□□ -0.38
RoraP51448 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.66□□□□□ -0.38
RoraP51448 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RoraP51448 Proscos-202ENSMUST00000178990 666 ntBASIC12.66□□□□□ -0.38
RoraP51448 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RoraP51448 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
RoraP51448 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RoraP51448 Itm2b-204ENSMUST00000228637 783 ntBASIC12.66□□□□□ -0.38
RoraP51448 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RoraP51448 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RoraP51448 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RoraP51448 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.66□□□□□ -0.38
RoraP51448 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
RoraP51448 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.66□□□□□ -0.38
RoraP51448 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RoraP51448 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RoraP51448 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RoraP51448 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RoraP51448 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RoraP51448 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.66□□□□□ -0.38
RoraP51448 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.65□□□□□ -0.38
RoraP51448 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RoraP51448 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RoraP51448 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RoraP51448 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RoraP51448 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RoraP51448 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RoraP51448 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RoraP51448 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
RoraP51448 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RoraP51448 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RoraP51448 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RoraP51448 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RoraP51448 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.65□□□□□ -0.38
RoraP51448 Gm12742-201ENSMUST00000117326 410 ntBASIC12.65□□□□□ -0.38
RoraP51448 Gm12957-201ENSMUST00000117835 377 ntBASIC12.65□□□□□ -0.38
RoraP51448 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.65□□□□□ -0.38
RoraP51448 Gm10156-201ENSMUST00000122364 462 ntBASIC12.65□□□□□ -0.38
RoraP51448 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.65□□□□□ -0.38
RoraP51448 Mir1938-201ENSMUST00000158746 100 ntBASIC12.65□□□□□ -0.38
RoraP51448 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.65□□□□□ -0.38
RoraP51448 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RoraP51448 Gm27731-201ENSMUST00000185192 107 ntBASIC12.65□□□□□ -0.38
RoraP51448 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.65□□□□□ -0.38
RoraP51448 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.65□□□□□ -0.38
RoraP51448 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.65□□□□□ -0.38
RoraP51448 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RoraP51448 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RoraP51448 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.65□□□□□ -0.38
RoraP51448 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RoraP51448 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RoraP51448 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RoraP51448 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms