Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TubP50586 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
TubP50586 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.72□□□□□ -0.21
TubP50586 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.72□□□□□ -0.21
TubP50586 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
TubP50586 Gm9002-201ENSMUST00000178437 499 ntBASIC13.72□□□□□ -0.21
TubP50586 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.72□□□□□ -0.21
TubP50586 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TubP50586 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TubP50586 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TubP50586 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TubP50586 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TubP50586 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TubP50586 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TubP50586 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.72□□□□□ -0.21
TubP50586 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.72□□□□□ -0.21
TubP50586 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TubP50586 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TubP50586 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TubP50586 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TubP50586 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TubP50586 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TubP50586 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
TubP50586 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TubP50586 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TubP50586 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.72□□□□□ -0.21
TubP50586 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TubP50586 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TubP50586 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TubP50586 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TubP50586 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TubP50586 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.71□□□□□ -0.21
TubP50586 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.71□□□□□ -0.21
TubP50586 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TubP50586 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TubP50586 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TubP50586 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TubP50586 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TubP50586 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TubP50586 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TubP50586 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TubP50586 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TubP50586 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TubP50586 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TubP50586 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TubP50586 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TubP50586 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TubP50586 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TubP50586 Itm2b-204ENSMUST00000228637 783 ntBASIC13.71□□□□□ -0.21
TubP50586 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TubP50586 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TubP50586 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TubP50586 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TubP50586 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.71□□□□□ -0.22
TubP50586 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.7□□□□□ -0.22
TubP50586 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TubP50586 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.7□□□□□ -0.22
TubP50586 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TubP50586 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Gm6244-201ENSMUST00000178732 841 ntBASIC13.7□□□□□ -0.22
TubP50586 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Gm7287-201ENSMUST00000205267 602 ntBASIC13.7□□□□□ -0.22
TubP50586 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.7□□□□□ -0.22
TubP50586 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Gm5356-201ENSMUST00000093326 615 ntBASIC13.7□□□□□ -0.22
TubP50586 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.7□□□□□ -0.22
TubP50586 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.7□□□□□ -0.22
TubP50586 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TubP50586 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TubP50586 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TubP50586 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TubP50586 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.69□□□□□ -0.22
TubP50586 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TubP50586 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TubP50586 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TubP50586 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TubP50586 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TubP50586 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms