Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.73□□□□□ -0.05
Brca1P48754 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Brca1P48754 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brca1P48754 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Brca1P48754 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Brca1P48754 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brca1P48754 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Brca1P48754 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Brca1P48754 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brca1P48754 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brca1P48754 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brca1P48754 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brca1P48754 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.72□□□□□ -0.05
Brca1P48754 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Brca1P48754 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.72□□□□□ -0.05
Brca1P48754 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brca1P48754 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Brca1P48754 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brca1P48754 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Brca1P48754 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Brca1P48754 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brca1P48754 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Brca1P48754 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.72□□□□□ -0.05
Brca1P48754 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Brca1P48754 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
Brca1P48754 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.72□□□□□ -0.05
Brca1P48754 Gm9540-201ENSMUST00000188230 478 ntBASIC14.72□□□□□ -0.05
Brca1P48754 Rprl1-202ENSMUST00000198476 238 ntBASIC14.72□□□□□ -0.05
Brca1P48754 Gm19931-201ENSMUST00000198920 368 ntBASIC14.72□□□□□ -0.05
Brca1P48754 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brca1P48754 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.72□□□□□ -0.05
Brca1P48754 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brca1P48754 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brca1P48754 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brca1P48754 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Brca1P48754 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Brca1P48754 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brca1P48754 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Brca1P48754 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Brca1P48754 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Brca1P48754 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Brca1P48754 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brca1P48754 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brca1P48754 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.71□□□□□ -0.05
Brca1P48754 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brca1P48754 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Brca1P48754 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brca1P48754 Gm13996-201ENSMUST00000118456 430 ntBASIC14.71□□□□□ -0.05
Brca1P48754 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brca1P48754 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Brca1P48754 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Brca1P48754 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brca1P48754 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brca1P48754 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brca1P48754 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brca1P48754 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Brca1P48754 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Brca1P48754 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Brca1P48754 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Brca1P48754 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Brca1P48754 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Brca1P48754 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC14.71□□□□□ -0.06
Brca1P48754 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Brca1P48754 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.71□□□□□ -0.06
Brca1P48754 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.71□□□□□ -0.06
Brca1P48754 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.71□□□□□ -0.06
Brca1P48754 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.06
Brca1P48754 Mir6958-201ENSMUST00000184207 73 ntBASIC14.71□□□□□ -0.06
Brca1P48754 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.71□□□□□ -0.06
Brca1P48754 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.71□□□□□ -0.06
Brca1P48754 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Brca1P48754 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Brca1P48754 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Brca1P48754 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Brca1P48754 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Brca1P48754 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Brca1P48754 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Brca1P48754 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Brca1P48754 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.71□□□□□ -0.06
Brca1P48754 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Brca1P48754 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brca1P48754 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Brca1P48754 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brca1P48754 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brca1P48754 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.7□□□□□ -0.06
Brca1P48754 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brca1P48754 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brca1P48754 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Brca1P48754 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brca1P48754 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brca1P48754 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Brca1P48754 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Brca1P48754 Gm12380-201ENSMUST00000119012 544 ntBASIC14.7□□□□□ -0.06
Brca1P48754 Gm15131-201ENSMUST00000119124 595 ntBASIC14.7□□□□□ -0.06
Brca1P48754 Gm24845-201ENSMUST00000158034 109 ntBASIC14.7□□□□□ -0.06
Brca1P48754 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Brca1P48754 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.7□□□□□ -0.06
Brca1P48754 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.7□□□□□ -0.06
Brca1P48754 Gm19994-201ENSMUST00000217086 586 ntBASIC14.7□□□□□ -0.06
Brca1P48754 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms