Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Sox18P43680 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.88□□□□□ -0.35
Sox18P43680 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Sox18P43680 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.88□□□□□ -0.35
Sox18P43680 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.88□□□□□ -0.35
Sox18P43680 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.88□□□□□ -0.35
Sox18P43680 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Sox18P43680 Gm22334-201ENSMUST00000158070 133 ntBASIC12.88□□□□□ -0.35
Sox18P43680 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Gm3344-201ENSMUST00000169610 603 ntBASIC12.88□□□□□ -0.35
Sox18P43680 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Sox18P43680 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.88□□□□□ -0.35
Sox18P43680 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.88□□□□□ -0.35
Sox18P43680 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.88□□□□□ -0.35
Sox18P43680 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.88□□□□□ -0.35
Sox18P43680 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Sox18P43680 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.88□□□□□ -0.35
Sox18P43680 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sox18P43680 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sox18P43680 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.87□□□□□ -0.35
Sox18P43680 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sox18P43680 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Gm14017-201ENSMUST00000121934 386 ntBASIC12.87□□□□□ -0.35
Sox18P43680 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.87□□□□□ -0.35
Sox18P43680 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Sox18P43680 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Mir5120-201ENSMUST00000175020 78 ntBASIC12.87□□□□□ -0.35
Sox18P43680 AU022133-201ENSMUST00000200601 873 ntBASIC12.87□□□□□ -0.35
Sox18P43680 Gm43947-201ENSMUST00000203019 959 ntBASIC12.87□□□□□ -0.35
Sox18P43680 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.87□□□□□ -0.35
Sox18P43680 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.87□□□□□ -0.35
Sox18P43680 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 AC165260.5-201ENSMUST00000224640 1247 ntBASIC12.87□□□□□ -0.35
Sox18P43680 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.87□□□□□ -0.35
Sox18P43680 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Gm10146-201ENSMUST00000072739 309 ntBASIC12.87□□□□□ -0.35
Sox18P43680 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.87□□□□□ -0.35
Sox18P43680 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.87□□□□□ -0.35
Sox18P43680 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sox18P43680 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sox18P43680 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.87□□□□□ -0.35
Sox18P43680 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sox18P43680 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox18P43680 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox18P43680 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox18P43680 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox18P43680 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox18P43680 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox18P43680 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox18P43680 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Sox18P43680 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms