Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.82□□□□□ -0.36
Cdh4P39038 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.82□□□□□ -0.36
Cdh4P39038 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.82□□□□□ -0.36
Cdh4P39038 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.82□□□□□ -0.36
Cdh4P39038 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cdh4P39038 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cdh4P39038 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cdh4P39038 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.81□□□□□ -0.36
Cdh4P39038 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Cdh4P39038 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdh4P39038 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cdh4P39038 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Cdh4P39038 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.81□□□□□ -0.36
Cdh4P39038 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Cdh4P39038 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Cdh4P39038 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.81□□□□□ -0.36
Cdh4P39038 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.81□□□□□ -0.36
Cdh4P39038 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.81□□□□□ -0.36
Cdh4P39038 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.81□□□□□ -0.36
Cdh4P39038 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.81□□□□□ -0.36
Cdh4P39038 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Cdh4P39038 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cdh4P39038 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh4P39038 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh4P39038 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Cdh4P39038 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh4P39038 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cdh4P39038 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh4P39038 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Cdh4P39038 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh4P39038 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh4P39038 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cdh4P39038 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cdh4P39038 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cdh4P39038 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh4P39038 Gm11478-201ENSMUST00000117851 599 ntBASIC12.8□□□□□ -0.36
Cdh4P39038 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh4P39038 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh4P39038 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh4P39038 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh4P39038 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.8□□□□□ -0.36
Cdh4P39038 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cdh4P39038 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cdh4P39038 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Cdh4P39038 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.8□□□□□ -0.36
Cdh4P39038 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh4P39038 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh4P39038 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh4P39038 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh4P39038 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh4P39038 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdh4P39038 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh4P39038 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh4P39038 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh4P39038 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.8□□□□□ -0.36
Cdh4P39038 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh4P39038 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh4P39038 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.8□□□□□ -0.36
Cdh4P39038 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Cdh4P39038 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.79□□□□□ -0.36
Cdh4P39038 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdh4P39038 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh4P39038 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms