Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RetP35546 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.55□□□□□ -0.4
RetP35546 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.55□□□□□ -0.4
RetP35546 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.55□□□□□ -0.4
RetP35546 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
RetP35546 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.55□□□□□ -0.4
RetP35546 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Snora78-201ENSMUST00000158630 128 ntBASIC12.55□□□□□ -0.4
RetP35546 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Gm45784-201ENSMUST00000188360 142 ntBASIC12.55□□□□□ -0.4
RetP35546 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.55□□□□□ -0.4
RetP35546 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.55□□□□□ -0.4
RetP35546 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.55□□□□□ -0.4
RetP35546 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
RetP35546 Gm10478-201ENSMUST00000084451 396 ntBASIC12.55□□□□□ -0.4
RetP35546 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.55□□□□□ -0.4
RetP35546 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
RetP35546 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RetP35546 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.55□□□□□ -0.4
RetP35546 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RetP35546 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.54□□□□□ -0.4
RetP35546 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RetP35546 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RetP35546 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Gm13392-201ENSMUST00000117708 150 ntBASIC12.54□□□□□ -0.4
RetP35546 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
RetP35546 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RetP35546 Gm8062-201ENSMUST00000139696 444 ntBASIC12.54□□□□□ -0.4
RetP35546 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.54□□□□□ -0.4
RetP35546 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
RetP35546 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
RetP35546 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RetP35546 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.54□□□□□ -0.4
RetP35546 Gm42693-201ENSMUST00000196779 631 ntBASIC12.54□□□□□ -0.4
RetP35546 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.54□□□□□ -0.4
RetP35546 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
RetP35546 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RetP35546 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RetP35546 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RetP35546 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
RetP35546 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RetP35546 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RetP35546 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RetP35546 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.53□□□□□ -0.4
RetP35546 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RetP35546 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RetP35546 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RetP35546 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RetP35546 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RetP35546 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RetP35546 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RetP35546 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RetP35546 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms