Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.16□□□□□ -0.62
Col8a2P25318 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Gm12203-201ENSMUST00000118235 598 ntBASIC11.16□□□□□ -0.62
Col8a2P25318 Gm5687-201ENSMUST00000118252 640 ntBASIC11.16□□□□□ -0.62
Col8a2P25318 Gm11814-201ENSMUST00000119515 929 ntBASIC11.16□□□□□ -0.62
Col8a2P25318 Gm12209-201ENSMUST00000120089 596 ntBASIC11.16□□□□□ -0.62
Col8a2P25318 Gm16177-201ENSMUST00000120728 718 ntBASIC11.16□□□□□ -0.62
Col8a2P25318 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.16□□□□□ -0.62
Col8a2P25318 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Col8a2P25318 Gm18473-201ENSMUST00000220543 868 ntBASIC11.16□□□□□ -0.62
Col8a2P25318 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.16□□□□□ -0.62
Col8a2P25318 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.16□□□□□ -0.62
Col8a2P25318 Itm2b-204ENSMUST00000228637 783 ntBASIC11.16□□□□□ -0.62
Col8a2P25318 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.16□□□□□ -0.62
Col8a2P25318 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.16□□□□□ -0.62
Col8a2P25318 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.15□□□□□ -0.62
Col8a2P25318 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.15□□□□□ -0.62
Col8a2P25318 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.15□□□□□ -0.62
Col8a2P25318 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Col8a2P25318 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.15□□□□□ -0.62
Col8a2P25318 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.15□□□□□ -0.62
Col8a2P25318 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Gm24196-201ENSMUST00000179161 110 ntBASIC11.15□□□□□ -0.62
Col8a2P25318 Gm29127-201ENSMUST00000188304 517 ntBASIC11.15□□□□□ -0.62
Col8a2P25318 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.15□□□□□ -0.62
Col8a2P25318 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.15□□□□□ -0.62
Col8a2P25318 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.15□□□□□ -0.62
Col8a2P25318 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.15□□□□□ -0.62
Col8a2P25318 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.15□□□□□ -0.62
Col8a2P25318 Gm17794-201ENSMUST00000220252 955 ntBASIC11.15□□□□□ -0.62
Col8a2P25318 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Col8a2P25318 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Col8a2P25318 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.15□□□□□ -0.62
Col8a2P25318 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col8a2P25318 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Col8a2P25318 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col8a2P25318 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col8a2P25318 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Col8a2P25318 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col8a2P25318 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Col8a2P25318 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col8a2P25318 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.15□□□□□ -0.63
Col8a2P25318 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.15□□□□□ -0.63
Col8a2P25318 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.14□□□□□ -0.63
Col8a2P25318 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Col8a2P25318 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.14□□□□□ -0.63
Col8a2P25318 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Col8a2P25318 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col8a2P25318 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms