Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Irf8P23611 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.42□□□□□ -0.1
Irf8P23611 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.42□□□□□ -0.1
Irf8P23611 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.42□□□□□ -0.1
Irf8P23611 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Irf8P23611 Gm17794-201ENSMUST00000220252 955 ntBASIC14.42□□□□□ -0.1
Irf8P23611 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Irf8P23611 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Irf8P23611 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Irf8P23611 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Irf8P23611 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Irf8P23611 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Irf8P23611 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.42□□□□□ -0.1
Irf8P23611 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.42□□□□□ -0.1
Irf8P23611 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Irf8P23611 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.41□□□□□ -0.1
Irf8P23611 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Irf8P23611 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Irf8P23611 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Irf8P23611 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Irf8P23611 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.41□□□□□ -0.1
Irf8P23611 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.41□□□□□ -0.1
Irf8P23611 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Irf8P23611 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Irf8P23611 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.41□□□□□ -0.1
Irf8P23611 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Irf8P23611 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Irf8P23611 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Irf8P23611 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Irf8P23611 Gm14350-201ENSMUST00000116642 640 ntBASIC14.41□□□□□ -0.1
Irf8P23611 Mir1894-201ENSMUST00000122802 81 ntBASIC14.41□□□□□ -0.1
Irf8P23611 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Irf8P23611 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Irf8P23611 Gm6244-201ENSMUST00000178732 841 ntBASIC14.41□□□□□ -0.1
Irf8P23611 Gm7063-201ENSMUST00000186840 981 ntBASIC14.41□□□□□ -0.1
Irf8P23611 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.41□□□□□ -0.1
Irf8P23611 Gm38671-201ENSMUST00000200573 130 ntBASIC14.41□□□□□ -0.1
Irf8P23611 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.41□□□□□ -0.1
Irf8P23611 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.41□□□□□ -0.1
Irf8P23611 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.41□□□□□ -0.1
Irf8P23611 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Irf8P23611 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Irf8P23611 Gm5356-201ENSMUST00000093326 615 ntBASIC14.41□□□□□ -0.1
Irf8P23611 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Irf8P23611 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.41□□□□□ -0.1
Irf8P23611 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Irf8P23611 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Irf8P23611 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Irf8P23611 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Irf8P23611 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Irf8P23611 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.41□□□□□ -0.1
Irf8P23611 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Irf8P23611 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Irf8P23611 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Irf8P23611 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.4□□□□□ -0.1
Irf8P23611 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Irf8P23611 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.4□□□□□ -0.1
Irf8P23611 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Gm19931-201ENSMUST00000198920 368 ntBASIC14.4□□□□□ -0.1
Irf8P23611 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Gm44069-201ENSMUST00000204898 506 ntBASIC14.4□□□□□ -0.1
Irf8P23611 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.4□□□□□ -0.1
Irf8P23611 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.4□□□□□ -0.1
Irf8P23611 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Irf8P23611 Gm16372-201ENSMUST00000073088 450 ntBASIC14.4□□□□□ -0.1
Irf8P23611 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Irf8P23611 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Irf8P23611 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Irf8P23611 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Irf8P23611 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Irf8P23611 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Irf8P23611 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Irf8P23611 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Irf8P23611 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Irf8P23611 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Irf8P23611 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.39□□□□□ -0.11
Irf8P23611 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms