Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
BdnfP21237 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.87□□□□□ -0.35
BdnfP21237 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BdnfP21237 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
BdnfP21237 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
BdnfP21237 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BdnfP21237 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BdnfP21237 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BdnfP21237 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BdnfP21237 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
BdnfP21237 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BdnfP21237 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BdnfP21237 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
BdnfP21237 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BdnfP21237 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BdnfP21237 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.86□□□□□ -0.35
BdnfP21237 Gm21470-201ENSMUST00000187680 696 ntBASIC12.86□□□□□ -0.35
BdnfP21237 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
BdnfP21237 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
BdnfP21237 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.86□□□□□ -0.35
BdnfP21237 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BdnfP21237 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.86□□□□□ -0.35
BdnfP21237 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
BdnfP21237 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
BdnfP21237 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BdnfP21237 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.86□□□□□ -0.35
BdnfP21237 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BdnfP21237 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
BdnfP21237 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
BdnfP21237 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
BdnfP21237 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BdnfP21237 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
BdnfP21237 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
BdnfP21237 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.86□□□□□ -0.35
BdnfP21237 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.85□□□□□ -0.35
BdnfP21237 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
BdnfP21237 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
BdnfP21237 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Gm15653-201ENSMUST00000119247 907 ntBASIC12.85□□□□□ -0.35
BdnfP21237 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.85□□□□□ -0.35
BdnfP21237 Gm27618-201ENSMUST00000183671 60 ntBASIC12.85□□□□□ -0.35
BdnfP21237 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.85□□□□□ -0.35
BdnfP21237 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.85□□□□□ -0.35
BdnfP21237 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Gm9229-201ENSMUST00000222777 126 ntBASIC12.85□□□□□ -0.35
BdnfP21237 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
BdnfP21237 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.85□□□□□ -0.35
BdnfP21237 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
BdnfP21237 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.85□□□□□ -0.35
BdnfP21237 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
BdnfP21237 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.85□□□□□ -0.35
BdnfP21237 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BdnfP21237 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.84□□□□□ -0.35
BdnfP21237 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.84□□□□□ -0.35
BdnfP21237 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms