Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ly6c1P0CW02 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.25□□□□□ -0.61
Ly6c1P0CW02 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ly6c1P0CW02 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ly6c1P0CW02 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Gm649-201ENSMUST00000117284 1054 ntBASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Gm9002-201ENSMUST00000178437 499 ntBASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Gm6244-201ENSMUST00000178732 841 ntBASIC11.24□□□□□ -0.61
Ly6c1P0CW02 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Gm38144-201ENSMUST00000192790 465 ntBASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.24□□□□□ -0.61
Ly6c1P0CW02 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.24□□□□□ -0.61
Ly6c1P0CW02 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.24□□□□□ -0.61
Ly6c1P0CW02 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ly6c1P0CW02 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms