Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc9P09633 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hoxc9P09633 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC17.21■□□□□ 0.34
Hoxc9P09633 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hoxc9P09633 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Hoxc9P09633 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Hoxc9P09633 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Gm44775-201ENSMUST00000207266 1456 ntBASIC17.2■□□□□ 0.34
Hoxc9P09633 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Gm14704-201ENSMUST00000120300 874 ntBASIC17.2■□□□□ 0.34
Hoxc9P09633 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC17.2■□□□□ 0.34
Hoxc9P09633 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC17.2■□□□□ 0.34
Hoxc9P09633 Gm4819-201ENSMUST00000182170 1009 ntBASIC17.2■□□□□ 0.34
Hoxc9P09633 Mir7070-201ENSMUST00000183657 86 ntBASIC17.2■□□□□ 0.34
Hoxc9P09633 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Hoxc9P09633 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC17.2■□□□□ 0.34
Hoxc9P09633 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Gm4782-201ENSMUST00000168705 2046 ntBASIC17.2■□□□□ 0.34
Hoxc9P09633 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc9P09633 Gm6015-201ENSMUST00000217493 1586 ntBASIC17.19■□□□□ 0.34
Hoxc9P09633 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Gm8228-201ENSMUST00000189949 2192 ntBASIC17.19■□□□□ 0.34
Hoxc9P09633 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Hoxc9P09633 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC17.19■□□□□ 0.34
Hoxc9P09633 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC17.19■□□□□ 0.34
Hoxc9P09633 Gm7619-201ENSMUST00000210649 1282 ntBASIC17.19■□□□□ 0.34
Hoxc9P09633 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hoxc9P09633 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Hoxc9P09633 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc9P09633 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Hoxc9P09633 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc9P09633 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc9P09633 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC17.18■□□□□ 0.34
Hoxc9P09633 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc9P09633 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc9P09633 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc9P09633 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Hoxc9P09633 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc9P09633 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc9P09633 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc9P09633 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc9P09633 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC17.18■□□□□ 0.34
Hoxc9P09633 Gm2606-201ENSMUST00000100754 1002 ntBASIC17.18■□□□□ 0.34
Hoxc9P09633 Gm25214-201ENSMUST00000104573 129 ntBASIC17.18■□□□□ 0.34
Hoxc9P09633 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc9P09633 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc9P09633 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC17.18■□□□□ 0.34
Hoxc9P09633 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Hoxc9P09633 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc9P09633 Gm7293-201ENSMUST00000216682 1007 ntBASIC17.18■□□□□ 0.34
Hoxc9P09633 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC17.18■□□□□ 0.34
Hoxc9P09633 Mettl6-204ENSMUST00000227595 1027 ntBASIC17.18■□□□□ 0.34
Hoxc9P09633 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc9P09633 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc9P09633 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc9P09633 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc9P09633 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc9P09633 Gm5466-201ENSMUST00000119395 1890 ntBASIC17.18■□□□□ 0.34
Hoxc9P09633 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC17.18■□□□□ 0.34
Hoxc9P09633 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc9P09633 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms