Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
NclP09405 Gm42872-201ENSMUST00000200026 1967 ntBASIC19.83■□□□□ 0.76
NclP09405 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NclP09405 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NclP09405 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NclP09405 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NclP09405 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NclP09405 AC159649.2-201ENSMUST00000222984 3223 ntBASIC19.82■□□□□ 0.76
NclP09405 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC19.82■□□□□ 0.76
NclP09405 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NclP09405 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NclP09405 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC19.82■□□□□ 0.76
NclP09405 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NclP09405 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NclP09405 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NclP09405 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NclP09405 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NclP09405 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NclP09405 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NclP09405 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NclP09405 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NclP09405 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NclP09405 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NclP09405 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NclP09405 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
NclP09405 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NclP09405 Gm30238-201ENSMUST00000195528 2603 ntBASIC19.81■□□□□ 0.76
NclP09405 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NclP09405 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NclP09405 Il17rd-203ENSMUST00000225146 3366 ntBASIC19.81■□□□□ 0.76
NclP09405 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NclP09405 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NclP09405 Gm38319-201ENSMUST00000194537 1266 ntBASIC19.81■□□□□ 0.76
NclP09405 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC19.81■□□□□ 0.76
NclP09405 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
NclP09405 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NclP09405 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NclP09405 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC19.81■□□□□ 0.76
NclP09405 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NclP09405 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NclP09405 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NclP09405 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NclP09405 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NclP09405 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NclP09405 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
NclP09405 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NclP09405 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NclP09405 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NclP09405 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NclP09405 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NclP09405 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NclP09405 Gm45684-201ENSMUST00000210244 1571 ntBASIC19.8■□□□□ 0.76
NclP09405 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NclP09405 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NclP09405 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NclP09405 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NclP09405 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NclP09405 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NclP09405 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC19.8■□□□□ 0.76
NclP09405 Gm45331-201ENSMUST00000209868 554 ntBASIC19.8■□□□□ 0.76
NclP09405 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC19.8■□□□□ 0.76
NclP09405 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC19.8■□□□□ 0.76
NclP09405 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NclP09405 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NclP09405 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NclP09405 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NclP09405 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NclP09405 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NclP09405 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NclP09405 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NclP09405 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NclP09405 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
NclP09405 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NclP09405 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NclP09405 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NclP09405 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NclP09405 Gm12500-202ENSMUST00000186471 2428 ntBASIC19.79■□□□□ 0.76
NclP09405 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NclP09405 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC19.79■□□□□ 0.76
NclP09405 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC19.79■□□□□ 0.76
NclP09405 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
NclP09405 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC19.79■□□□□ 0.76
NclP09405 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC19.79■□□□□ 0.76
NclP09405 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NclP09405 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NclP09405 Gm8399-201ENSMUST00000082300 1117 ntBASIC19.79■□□□□ 0.76
NclP09405 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC19.79■□□□□ 0.76
NclP09405 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NclP09405 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NclP09405 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NclP09405 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NclP09405 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC19.78■□□□□ 0.76
NclP09405 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NclP09405 AC096628.2-201ENSMUST00000225443 1413 ntBASIC19.78■□□□□ 0.76
NclP09405 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NclP09405 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NclP09405 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NclP09405 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC19.78■□□□□ 0.76
NclP09405 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NclP09405 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms