Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.17□□□□□ -0.14
TnfP06804 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TnfP06804 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TnfP06804 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.16□□□□□ -0.14
TnfP06804 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TnfP06804 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TnfP06804 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TnfP06804 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TnfP06804 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TnfP06804 Gm5187-201ENSMUST00000117317 991 ntBASIC14.16□□□□□ -0.14
TnfP06804 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.16□□□□□ -0.14
TnfP06804 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TnfP06804 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.16□□□□□ -0.14
TnfP06804 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TnfP06804 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.16□□□□□ -0.14
TnfP06804 Gm42693-201ENSMUST00000196779 631 ntBASIC14.16□□□□□ -0.14
TnfP06804 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.16□□□□□ -0.14
TnfP06804 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.16□□□□□ -0.14
TnfP06804 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TnfP06804 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TnfP06804 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TnfP06804 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TnfP06804 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TnfP06804 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TnfP06804 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TnfP06804 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TnfP06804 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TnfP06804 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TnfP06804 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.16□□□□□ -0.14
TnfP06804 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TnfP06804 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TnfP06804 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TnfP06804 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.15□□□□□ -0.14
TnfP06804 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TnfP06804 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TnfP06804 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TnfP06804 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TnfP06804 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TnfP06804 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TnfP06804 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TnfP06804 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.15□□□□□ -0.14
TnfP06804 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.15□□□□□ -0.14
TnfP06804 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TnfP06804 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
TnfP06804 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TnfP06804 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TnfP06804 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TnfP06804 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TnfP06804 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TnfP06804 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TnfP06804 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TnfP06804 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TnfP06804 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TnfP06804 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TnfP06804 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TnfP06804 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TnfP06804 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TnfP06804 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TnfP06804 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
TnfP06804 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
TnfP06804 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
TnfP06804 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.14□□□□□ -0.15
TnfP06804 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TnfP06804 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.14□□□□□ -0.15
TnfP06804 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.14□□□□□ -0.15
TnfP06804 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TnfP06804 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TnfP06804 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TnfP06804 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.14□□□□□ -0.15
TnfP06804 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.14□□□□□ -0.15
TnfP06804 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TnfP06804 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.14□□□□□ -0.15
TnfP06804 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.14□□□□□ -0.15
TnfP06804 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms