Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PrnpP04925 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
PrnpP04925 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PrnpP04925 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PrnpP04925 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
PrnpP04925 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PrnpP04925 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PrnpP04925 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PrnpP04925 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PrnpP04925 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PrnpP04925 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PrnpP04925 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
PrnpP04925 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
PrnpP04925 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PrnpP04925 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PrnpP04925 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PrnpP04925 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PrnpP04925 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.79□□□□□ -0.2
PrnpP04925 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PrnpP04925 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PrnpP04925 Gm8738-201ENSMUST00000172606 329 ntBASIC13.79□□□□□ -0.2
PrnpP04925 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.79□□□□□ -0.2
PrnpP04925 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PrnpP04925 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PrnpP04925 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.79□□□□□ -0.2
PrnpP04925 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.79□□□□□ -0.2
PrnpP04925 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.79□□□□□ -0.2
PrnpP04925 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.79□□□□□ -0.2
PrnpP04925 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.79□□□□□ -0.2
PrnpP04925 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PrnpP04925 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PrnpP04925 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PrnpP04925 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.79□□□□□ -0.2
PrnpP04925 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.79□□□□□ -0.2
PrnpP04925 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PrnpP04925 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
PrnpP04925 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.79□□□□□ -0.2
PrnpP04925 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PrnpP04925 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.78□□□□□ -0.2
PrnpP04925 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.78□□□□□ -0.2
PrnpP04925 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.78□□□□□ -0.2
PrnpP04925 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PrnpP04925 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.78□□□□□ -0.2
PrnpP04925 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.78□□□□□ -0.2
PrnpP04925 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.78□□□□□ -0.2
PrnpP04925 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PrnpP04925 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PrnpP04925 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.77□□□□□ -0.2
PrnpP04925 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
PrnpP04925 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.2
PrnpP04925 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
PrnpP04925 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
PrnpP04925 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
PrnpP04925 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PrnpP04925 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PrnpP04925 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
PrnpP04925 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.77□□□□□ -0.21
PrnpP04925 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PrnpP04925 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PrnpP04925 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PrnpP04925 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PrnpP04925 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.77□□□□□ -0.21
PrnpP04925 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.77□□□□□ -0.21
PrnpP04925 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PrnpP04925 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PrnpP04925 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PrnpP04925 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PrnpP04925 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
PrnpP04925 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PrnpP04925 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms