Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC16.11■□□□□ 0.17
Col4a1P02463 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Col4a1P02463 Ighv8-10-201ENSMUST00000199579 358 ntBASIC16.11■□□□□ 0.17
Col4a1P02463 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC16.11■□□□□ 0.17
Col4a1P02463 AC165260.3-202ENSMUST00000224550 1031 ntBASIC16.11■□□□□ 0.17
Col4a1P02463 AC167013.1-201ENSMUST00000228592 202 ntBASIC16.11■□□□□ 0.17
Col4a1P02463 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Col4a1P02463 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Col4a1P02463 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC16.11■□□□□ 0.17
Col4a1P02463 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Gm7789-202ENSMUST00000211273 1400 ntBASIC16.11■□□□□ 0.17
Col4a1P02463 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.11■□□□□ 0.17
Col4a1P02463 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Gm15459-201ENSMUST00000117405 1941 ntBASIC16.11■□□□□ 0.17
Col4a1P02463 Gm8355-201ENSMUST00000177767 1941 ntBASIC16.11■□□□□ 0.17
Col4a1P02463 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.11■□□□□ 0.17
Col4a1P02463 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC16.11■□□□□ 0.17
Col4a1P02463 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC16.11■□□□□ 0.17
Col4a1P02463 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Gm43289-201ENSMUST00000200537 1475 ntBASIC16.11■□□□□ 0.17
Col4a1P02463 Gm10782-202ENSMUST00000223775 1480 ntBASIC16.11■□□□□ 0.17
Col4a1P02463 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC16.11■□□□□ 0.17
Col4a1P02463 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Col4a1P02463 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC16.11■□□□□ 0.17
Col4a1P02463 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Col4a1P02463 Gm26956-201ENSMUST00000182176 986 ntBASIC16.11■□□□□ 0.17
Col4a1P02463 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Mir339-201ENSMUST00000083659 96 ntBASIC16.11■□□□□ 0.17
Col4a1P02463 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col4a1P02463 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Col4a1P02463 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Col4a1P02463 Gm14130-201ENSMUST00000118417 987 ntBASIC16.1■□□□□ 0.17
Col4a1P02463 Gm14017-201ENSMUST00000121934 386 ntBASIC16.1■□□□□ 0.17
Col4a1P02463 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC16.1■□□□□ 0.17
Col4a1P02463 Gm15276-201ENSMUST00000145953 498 ntBASIC16.1■□□□□ 0.17
Col4a1P02463 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Gm27046-201ENSMUST00000182160 463 ntBASIC16.1■□□□□ 0.17
Col4a1P02463 Mir6927-201ENSMUST00000184494 71 ntBASIC16.1■□□□□ 0.17
Col4a1P02463 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC16.1■□□□□ 0.17
Col4a1P02463 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC16.1■□□□□ 0.17
Col4a1P02463 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Col4a1P02463 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col4a1P02463 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.09■□□□□ 0.17
Col4a1P02463 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col4a1P02463 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC16.09■□□□□ 0.17
Col4a1P02463 Gm18753-201ENSMUST00000201000 566 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms