Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
IghmP01872 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IghmP01872 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IghmP01872 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IghmP01872 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
IghmP01872 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
IghmP01872 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
IghmP01872 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IghmP01872 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IghmP01872 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IghmP01872 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
IghmP01872 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.54□□□□□ -0.4
IghmP01872 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.54□□□□□ -0.4
IghmP01872 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
IghmP01872 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
IghmP01872 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IghmP01872 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
IghmP01872 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IghmP01872 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.54□□□□□ -0.4
IghmP01872 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
IghmP01872 Gm24694-201ENSMUST00000180054 110 ntBASIC12.54□□□□□ -0.4
IghmP01872 Gm27663-201ENSMUST00000184839 110 ntBASIC12.54□□□□□ -0.4
IghmP01872 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.54□□□□□ -0.4
IghmP01872 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.54□□□□□ -0.4
IghmP01872 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
IghmP01872 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.54□□□□□ -0.4
IghmP01872 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
IghmP01872 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.54□□□□□ -0.4
IghmP01872 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
IghmP01872 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IghmP01872 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.54□□□□□ -0.4
IghmP01872 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.54□□□□□ -0.4
IghmP01872 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IghmP01872 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
IghmP01872 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
IghmP01872 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IghmP01872 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
IghmP01872 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IghmP01872 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
IghmP01872 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
IghmP01872 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
IghmP01872 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
IghmP01872 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
IghmP01872 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
IghmP01872 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
IghmP01872 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Gm12151-201ENSMUST00000121374 290 ntBASIC12.53□□□□□ -0.4
IghmP01872 Gm14719-201ENSMUST00000121891 340 ntBASIC12.53□□□□□ -0.4
IghmP01872 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.53□□□□□ -0.4
IghmP01872 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
IghmP01872 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Gm29608-201ENSMUST00000190444 463 ntBASIC12.53□□□□□ -0.4
IghmP01872 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.53□□□□□ -0.4
IghmP01872 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.53□□□□□ -0.4
IghmP01872 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
IghmP01872 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IghmP01872 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.53□□□□□ -0.4
IghmP01872 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.52□□□□□ -0.4
IghmP01872 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
IghmP01872 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
IghmP01872 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
IghmP01872 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
IghmP01872 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
IghmP01872 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
IghmP01872 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
IghmP01872 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
IghmP01872 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
IghmP01872 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
IghmP01872 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.52□□□□□ -0.4
IghmP01872 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
IghmP01872 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
IghmP01872 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
IghmP01872 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms