Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.43□□□□□ -0.42
BckdkO55028 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
BckdkO55028 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.43□□□□□ -0.42
BckdkO55028 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
BckdkO55028 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
BckdkO55028 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
BckdkO55028 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
BckdkO55028 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.43□□□□□ -0.42
BckdkO55028 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
BckdkO55028 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.43□□□□□ -0.42
BckdkO55028 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.43□□□□□ -0.42
BckdkO55028 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
BckdkO55028 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
BckdkO55028 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.43□□□□□ -0.42
BckdkO55028 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BckdkO55028 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.42□□□□□ -0.42
BckdkO55028 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.42□□□□□ -0.42
BckdkO55028 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
BckdkO55028 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
BckdkO55028 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
BckdkO55028 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.42□□□□□ -0.42
BckdkO55028 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
BckdkO55028 Mir7654-201ENSMUST00000185082 70 ntBASIC12.42□□□□□ -0.42
BckdkO55028 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.42□□□□□ -0.42
BckdkO55028 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
BckdkO55028 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
BckdkO55028 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
BckdkO55028 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BckdkO55028 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
BckdkO55028 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
BckdkO55028 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.41□□□□□ -0.42
BckdkO55028 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.41□□□□□ -0.42
BckdkO55028 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
BckdkO55028 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.41□□□□□ -0.42
BckdkO55028 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.41□□□□□ -0.42
BckdkO55028 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
BckdkO55028 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms