Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.17□□□□□ -0.14
Itgb3O54890 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.17□□□□□ -0.14
Itgb3O54890 Gm29127-201ENSMUST00000188304 517 ntBASIC14.17□□□□□ -0.14
Itgb3O54890 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.17□□□□□ -0.14
Itgb3O54890 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.17□□□□□ -0.14
Itgb3O54890 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.17□□□□□ -0.14
Itgb3O54890 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
Itgb3O54890 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.17□□□□□ -0.14
Itgb3O54890 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.17□□□□□ -0.14
Itgb3O54890 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.17□□□□□ -0.14
Itgb3O54890 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Itgb3O54890 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3O54890 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.16□□□□□ -0.14
Itgb3O54890 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Itgb3O54890 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3O54890 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3O54890 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3O54890 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Itgb3O54890 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3O54890 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3O54890 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.16□□□□□ -0.14
Itgb3O54890 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3O54890 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.16□□□□□ -0.14
Itgb3O54890 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Itgb3O54890 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.16□□□□□ -0.14
Itgb3O54890 Mir7085-201ENSMUST00000184353 66 ntBASIC14.16□□□□□ -0.14
Itgb3O54890 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.16□□□□□ -0.14
Itgb3O54890 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.16□□□□□ -0.14
Itgb3O54890 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.16□□□□□ -0.14
Itgb3O54890 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.16□□□□□ -0.14
Itgb3O54890 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.16□□□□□ -0.14
Itgb3O54890 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.16□□□□□ -0.14
Itgb3O54890 Gm16372-201ENSMUST00000073088 450 ntBASIC14.16□□□□□ -0.14
Itgb3O54890 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3O54890 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3O54890 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3O54890 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.16□□□□□ -0.14
Itgb3O54890 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.16□□□□□ -0.14
Itgb3O54890 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3O54890 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3O54890 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3O54890 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Itgb3O54890 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Itgb3O54890 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Itgb3O54890 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.15□□□□□ -0.14
Itgb3O54890 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3O54890 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3O54890 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3O54890 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3O54890 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3O54890 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Itgb3O54890 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Itgb3O54890 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Itgb3O54890 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3O54890 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3O54890 Gm12203-201ENSMUST00000118235 598 ntBASIC14.15□□□□□ -0.14
Itgb3O54890 Gm12209-201ENSMUST00000120089 596 ntBASIC14.15□□□□□ -0.14
Itgb3O54890 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3O54890 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.15□□□□□ -0.14
Itgb3O54890 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.15□□□□□ -0.14
Itgb3O54890 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Itgb3O54890 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3O54890 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.15□□□□□ -0.14
Itgb3O54890 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.15□□□□□ -0.14
Itgb3O54890 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.15□□□□□ -0.14
Itgb3O54890 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.15□□□□□ -0.14
Itgb3O54890 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.15□□□□□ -0.14
Itgb3O54890 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.15□□□□□ -0.14
Itgb3O54890 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3O54890 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Itgb3O54890 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3O54890 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3O54890 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3O54890 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Itgb3O54890 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Itgb3O54890 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3O54890 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3O54890 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Itgb3O54890 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Itgb3O54890 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms