Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.58□□□□□ -0.24
Limk2O54785 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Gm11814-201ENSMUST00000119515 929 ntBASIC13.58□□□□□ -0.24
Limk2O54785 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.58□□□□□ -0.24
Limk2O54785 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.58□□□□□ -0.24
Limk2O54785 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.58□□□□□ -0.24
Limk2O54785 Gm15429-201ENSMUST00000151268 798 ntBASIC13.58□□□□□ -0.24
Limk2O54785 Snora78-201ENSMUST00000158630 128 ntBASIC13.58□□□□□ -0.24
Limk2O54785 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Limk2O54785 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Gm45784-201ENSMUST00000188360 142 ntBASIC13.58□□□□□ -0.24
Limk2O54785 Gm45331-201ENSMUST00000209868 554 ntBASIC13.58□□□□□ -0.24
Limk2O54785 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Limk2O54785 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Limk2O54785 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Limk2O54785 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Limk2O54785 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Limk2O54785 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Limk2O54785 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.57□□□□□ -0.24
Limk2O54785 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Limk2O54785 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 Gm8463-201ENSMUST00000208573 613 ntBASIC13.57□□□□□ -0.24
Limk2O54785 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 Gm6983-201ENSMUST00000214912 628 ntBASIC13.57□□□□□ -0.24
Limk2O54785 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.57□□□□□ -0.24
Limk2O54785 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.57□□□□□ -0.24
Limk2O54785 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Limk2O54785 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Limk2O54785 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Limk2O54785 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Limk2O54785 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Limk2O54785 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Limk2O54785 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.56□□□□□ -0.24
Limk2O54785 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Limk2O54785 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Limk2O54785 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.56□□□□□ -0.24
Limk2O54785 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.56□□□□□ -0.24
Limk2O54785 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.56□□□□□ -0.24
Limk2O54785 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Gm7287-201ENSMUST00000205267 602 ntBASIC13.56□□□□□ -0.24
Limk2O54785 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.56□□□□□ -0.24
Limk2O54785 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Limk2O54785 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Limk2O54785 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.55□□□□□ -0.24
Limk2O54785 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms