Protein–RNA interactions for Protein: O35683

Ndufa1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa1O35683 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ndufa1O35683 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ndufa1O35683 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ndufa1O35683 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ndufa1O35683 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ndufa1O35683 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ndufa1O35683 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC9.59□□□□□ -0.87
Ndufa1O35683 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Ndufa1O35683 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC9.59□□□□□ -0.87
Ndufa1O35683 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC9.59□□□□□ -0.87
Ndufa1O35683 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC9.59□□□□□ -0.87
Ndufa1O35683 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Ndufa1O35683 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Ndufa1O35683 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC9.59□□□□□ -0.87
Ndufa1O35683 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Ndufa1O35683 Gm9385-201ENSMUST00000117563 472 ntBASIC9.59□□□□□ -0.87
Ndufa1O35683 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC9.59□□□□□ -0.87
Ndufa1O35683 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC9.59□□□□□ -0.87
Ndufa1O35683 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC9.59□□□□□ -0.87
Ndufa1O35683 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC9.59□□□□□ -0.87
Ndufa1O35683 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Ndufa1O35683 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Gm43417-201ENSMUST00000201586 5207 ntBASIC9.59□□□□□ -0.87
Ndufa1O35683 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ndufa1O35683 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Ndufa1O35683 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Ndufa1O35683 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Ndufa1O35683 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Ndufa1O35683 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC9.58□□□□□ -0.88
Ndufa1O35683 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Ndufa1O35683 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC9.58□□□□□ -0.88
Ndufa1O35683 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Ndufa1O35683 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ndufa1O35683 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Ndufa1O35683 Gm44851-201ENSMUST00000205735 2309 ntBASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms