Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.39□□□□□ -0.11
Nr1i3O35627 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.39□□□□□ -0.11
Nr1i3O35627 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nr1i3O35627 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.39□□□□□ -0.11
Nr1i3O35627 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.39□□□□□ -0.11
Nr1i3O35627 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.39□□□□□ -0.11
Nr1i3O35627 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.39□□□□□ -0.11
Nr1i3O35627 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Gm27989-201ENSMUST00000184721 107 ntBASIC14.39□□□□□ -0.11
Nr1i3O35627 Gm29667-201ENSMUST00000190817 490 ntBASIC14.39□□□□□ -0.11
Nr1i3O35627 Gm19931-201ENSMUST00000198920 368 ntBASIC14.39□□□□□ -0.11
Nr1i3O35627 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Nr1i3O35627 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
Nr1i3O35627 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Nr1i3O35627 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nr1i3O35627 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nr1i3O35627 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Nr1i3O35627 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.38□□□□□ -0.11
Nr1i3O35627 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.38□□□□□ -0.11
Nr1i3O35627 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.38□□□□□ -0.11
Nr1i3O35627 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Nr1i3O35627 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.38□□□□□ -0.11
Nr1i3O35627 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nr1i3O35627 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.38□□□□□ -0.11
Nr1i3O35627 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.38□□□□□ -0.11
Nr1i3O35627 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Nr1i3O35627 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Mir7684-201ENSMUST00000183858 60 ntBASIC14.38□□□□□ -0.11
Nr1i3O35627 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.38□□□□□ -0.11
Nr1i3O35627 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.38□□□□□ -0.11
Nr1i3O35627 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.38□□□□□ -0.11
Nr1i3O35627 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.38□□□□□ -0.11
Nr1i3O35627 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.38□□□□□ -0.11
Nr1i3O35627 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.38□□□□□ -0.11
Nr1i3O35627 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.38□□□□□ -0.11
Nr1i3O35627 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr1i3O35627 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.38□□□□□ -0.11
Nr1i3O35627 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Nr1i3O35627 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr1i3O35627 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr1i3O35627 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr1i3O35627 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.37□□□□□ -0.11
Nr1i3O35627 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.37□□□□□ -0.11
Nr1i3O35627 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.37□□□□□ -0.11
Nr1i3O35627 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr1i3O35627 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr1i3O35627 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Nr1i3O35627 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nr1i3O35627 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nr1i3O35627 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.37□□□□□ -0.11
Nr1i3O35627 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr1i3O35627 Gm9797-201ENSMUST00000052902 613 ntBASIC14.37□□□□□ -0.11
Nr1i3O35627 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr1i3O35627 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr1i3O35627 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.37□□□□□ -0.11
Nr1i3O35627 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nr1i3O35627 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nr1i3O35627 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr1i3O35627 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms