Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm8116-201ENSMUST00000182917 1201 ntBASIC10.59□□□□□ -0.71
Efnb3O35393 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC10.59□□□□□ -0.71
Efnb3O35393 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Efnb3O35393 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Efnb3O35393 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Efnb3O35393 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Efnb3O35393 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Efnb3O35393 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Efnb3O35393 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.58□□□□□ -0.72
Efnb3O35393 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC10.58□□□□□ -0.72
Efnb3O35393 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Efnb3O35393 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC10.58□□□□□ -0.72
Efnb3O35393 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Efnb3O35393 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Gm43125-201ENSMUST00000201724 730 ntBASIC10.58□□□□□ -0.72
Efnb3O35393 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.58□□□□□ -0.72
Efnb3O35393 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC10.58□□□□□ -0.72
Efnb3O35393 AC131997.1-201ENSMUST00000228611 1229 ntBASIC10.58□□□□□ -0.72
Efnb3O35393 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Efnb3O35393 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Efnb3O35393 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Efnb3O35393 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Efnb3O35393 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 AC124751.1-201ENSMUST00000222716 1408 ntBASIC10.58□□□□□ -0.72
Efnb3O35393 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Efnb3O35393 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Efnb3O35393 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Efnb3O35393 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Efnb3O35393 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.57□□□□□ -0.72
Efnb3O35393 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.57□□□□□ -0.72
Efnb3O35393 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm22065-201ENSMUST00000103753 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm22066-201ENSMUST00000103761 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm24932-201ENSMUST00000103763 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm24115-201ENSMUST00000103799 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm22190-201ENSMUST00000103827 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm22191-201ENSMUST00000103831 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm24721-201ENSMUST00000103849 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm28018-201ENSMUST00000103869 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm26399-201ENSMUST00000103937 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC10.57□□□□□ -0.72
Efnb3O35393 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Efnb3O35393 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.57□□□□□ -0.72
Efnb3O35393 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Efnb3O35393 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.57□□□□□ -0.72
Efnb3O35393 Gm25349-201ENSMUST00000177728 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm23616-201ENSMUST00000177797 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm25871-201ENSMUST00000177816 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm24752-201ENSMUST00000178240 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm24496-201ENSMUST00000178287 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm25649-201ENSMUST00000178476 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm25548-201ENSMUST00000178681 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm23147-201ENSMUST00000178841 110 ntBASIC10.57□□□□□ -0.72
Efnb3O35393 Gm26095-201ENSMUST00000179270 110 ntBASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms