Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.46□□□□□ -0.41
Hps1O08983 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hps1O08983 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hps1O08983 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Hps1O08983 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Hps1O08983 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Hps1O08983 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.46□□□□□ -0.41
Hps1O08983 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hps1O08983 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hps1O08983 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hps1O08983 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Hps1O08983 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hps1O08983 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hps1O08983 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hps1O08983 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hps1O08983 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hps1O08983 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hps1O08983 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.46□□□□□ -0.42
Hps1O08983 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hps1O08983 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hps1O08983 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hps1O08983 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hps1O08983 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Hps1O08983 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hps1O08983 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hps1O08983 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.45□□□□□ -0.42
Hps1O08983 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Hps1O08983 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.45□□□□□ -0.42
Hps1O08983 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Syt7-204ENSMUST00000223586 1344 ntBASIC12.45□□□□□ -0.42
Hps1O08983 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Hps1O08983 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.45□□□□□ -0.42
Hps1O08983 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.45□□□□□ -0.42
Hps1O08983 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.45□□□□□ -0.42
Hps1O08983 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.45□□□□□ -0.42
Hps1O08983 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.45□□□□□ -0.42
Hps1O08983 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.45□□□□□ -0.42
Hps1O08983 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Paupar-201ENSMUST00000194826 3482 ntBASIC12.45□□□□□ -0.42
Hps1O08983 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.45□□□□□ -0.42
Hps1O08983 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.45□□□□□ -0.42
Hps1O08983 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.45□□□□□ -0.42
Hps1O08983 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hps1O08983 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Hps1O08983 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Hps1O08983 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Hps1O08983 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Hps1O08983 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Hps1O08983 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.44□□□□□ -0.42
Hps1O08983 Gm6912-201ENSMUST00000117218 544 ntBASIC12.44□□□□□ -0.42
Hps1O08983 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.44□□□□□ -0.42
Hps1O08983 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.44□□□□□ -0.42
Hps1O08983 Gm44344-201ENSMUST00000200287 129 ntBASIC12.44□□□□□ -0.42
Hps1O08983 Gm44608-201ENSMUST00000206827 855 ntBASIC12.44□□□□□ -0.42
Hps1O08983 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hps1O08983 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hps1O08983 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms