Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trove2O08848 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trove2O08848 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trove2O08848 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trove2O08848 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Trove2O08848 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trove2O08848 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trove2O08848 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.76□□□□□ -0.21
Trove2O08848 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trove2O08848 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trove2O08848 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trove2O08848 Gm43575-201ENSMUST00000196420 516 ntBASIC13.76□□□□□ -0.21
Trove2O08848 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.76□□□□□ -0.21
Trove2O08848 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.76□□□□□ -0.21
Trove2O08848 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trove2O08848 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trove2O08848 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trove2O08848 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trove2O08848 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trove2O08848 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trove2O08848 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trove2O08848 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
Trove2O08848 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.76□□□□□ -0.21
Trove2O08848 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trove2O08848 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trove2O08848 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.75□□□□□ -0.21
Trove2O08848 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.75□□□□□ -0.21
Trove2O08848 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.75□□□□□ -0.21
Trove2O08848 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Gm15957-201ENSMUST00000118893 974 ntBASIC13.75□□□□□ -0.21
Trove2O08848 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.75□□□□□ -0.21
Trove2O08848 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.75□□□□□ -0.21
Trove2O08848 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.75□□□□□ -0.21
Trove2O08848 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.75□□□□□ -0.21
Trove2O08848 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trove2O08848 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trove2O08848 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.75□□□□□ -0.21
Trove2O08848 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trove2O08848 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trove2O08848 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Trove2O08848 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trove2O08848 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.74□□□□□ -0.21
Trove2O08848 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trove2O08848 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trove2O08848 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trove2O08848 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trove2O08848 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trove2O08848 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trove2O08848 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trove2O08848 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trove2O08848 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trove2O08848 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trove2O08848 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trove2O08848 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trove2O08848 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.74□□□□□ -0.21
Trove2O08848 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.74□□□□□ -0.21
Trove2O08848 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.74□□□□□ -0.21
Trove2O08848 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.74□□□□□ -0.21
Trove2O08848 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trove2O08848 Gm9719-201ENSMUST00000162765 543 ntBASIC13.74□□□□□ -0.21
Trove2O08848 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trove2O08848 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.74□□□□□ -0.21
Trove2O08848 Gm27631-201ENSMUST00000184163 466 ntBASIC13.74□□□□□ -0.21
Trove2O08848 Gm18766-201ENSMUST00000189811 808 ntBASIC13.74□□□□□ -0.21
Trove2O08848 Gm45453-201ENSMUST00000211758 853 ntBASIC13.74□□□□□ -0.21
Trove2O08848 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trove2O08848 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trove2O08848 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trove2O08848 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trove2O08848 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.74□□□□□ -0.21
Trove2O08848 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trove2O08848 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trove2O08848 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.74□□□□□ -0.21
Trove2O08848 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trove2O08848 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trove2O08848 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trove2O08848 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trove2O08848 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms