Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NpcdF8VQB8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
NpcdF8VQB8 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Gm12217-201ENSMUST00000118858 696 ntBASIC16.06■□□□□ 0.16
NpcdF8VQB8 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Gm7593-201ENSMUST00000187246 644 ntBASIC16.06■□□□□ 0.16
NpcdF8VQB8 Gm10109-202ENSMUST00000206890 1211 ntBASIC16.06■□□□□ 0.16
NpcdF8VQB8 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NpcdF8VQB8 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NpcdF8VQB8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.05■□□□□ 0.16
NpcdF8VQB8 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.05■□□□□ 0.16
NpcdF8VQB8 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Gm14130-201ENSMUST00000118417 987 ntBASIC16.05■□□□□ 0.16
NpcdF8VQB8 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NpcdF8VQB8 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC16.05■□□□□ 0.16
NpcdF8VQB8 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC16.05■□□□□ 0.16
NpcdF8VQB8 AC126253.1-202ENSMUST00000226732 835 ntBASIC16.05■□□□□ 0.16
NpcdF8VQB8 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NpcdF8VQB8 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Gm15770-201ENSMUST00000117498 584 ntBASIC16.04■□□□□ 0.16
NpcdF8VQB8 Gm12403-201ENSMUST00000121384 959 ntBASIC16.04■□□□□ 0.16
NpcdF8VQB8 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.04■□□□□ 0.16
NpcdF8VQB8 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC16.04■□□□□ 0.16
NpcdF8VQB8 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC16.04■□□□□ 0.16
NpcdF8VQB8 Gm37835-201ENSMUST00000193305 361 ntBASIC16.04■□□□□ 0.16
NpcdF8VQB8 Gm38317-201ENSMUST00000195564 343 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 109.4 ms