Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.56□□□□□ -0.4
Colca2F8VPY8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Colca2F8VPY8 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Colca2F8VPY8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Colca2F8VPY8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Colca2F8VPY8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Colca2F8VPY8 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Colca2F8VPY8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.55□□□□□ -0.4
Colca2F8VPY8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Mir1943-201ENSMUST00000158276 73 ntBASIC12.55□□□□□ -0.4
Colca2F8VPY8 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.55□□□□□ -0.4
Colca2F8VPY8 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.55□□□□□ -0.4
Colca2F8VPY8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Colca2F8VPY8 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.54□□□□□ -0.4
Colca2F8VPY8 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.54□□□□□ -0.4
Colca2F8VPY8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Gm8913-201ENSMUST00000209491 641 ntBASIC12.54□□□□□ -0.4
Colca2F8VPY8 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.54□□□□□ -0.4
Colca2F8VPY8 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.54□□□□□ -0.4
Colca2F8VPY8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Colca2F8VPY8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.53□□□□□ -0.4
Colca2F8VPY8 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.53□□□□□ -0.4
Colca2F8VPY8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Gm9550-201ENSMUST00000161130 862 ntBASIC12.53□□□□□ -0.4
Colca2F8VPY8 Gm7467-201ENSMUST00000185173 652 ntBASIC12.53□□□□□ -0.4
Colca2F8VPY8 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.53□□□□□ -0.4
Colca2F8VPY8 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Colca2F8VPY8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms