Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Gm12928-201ENSMUST00000117115 573 ntBASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Gm9794-201ENSMUST00000202370 423 ntBASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Gm8463-201ENSMUST00000208573 613 ntBASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.32□□□□□ -0.6
Cpsf4lE9Q2N0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Gm12490-201ENSMUST00000120255 560 ntBASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cpsf4lE9Q2N0 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms