Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Gm12380-201ENSMUST00000119012 544 ntBASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Gm27552-201ENSMUST00000183351 62 ntBASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Gm27844-201ENSMUST00000183613 62 ntBASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col4a6B1AVK5 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Gm19931-201ENSMUST00000198920 368 ntBASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Gm44100-201ENSMUST00000204329 436 ntBASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Gm19994-201ENSMUST00000217086 586 ntBASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col4a6B1AVK5 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col4a6B1AVK5 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col4a6B1AVK5 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col4a6B1AVK5 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col4a6B1AVK5 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col4a6B1AVK5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col4a6B1AVK5 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.46□□□□□ -0.25
Col4a6B1AVK5 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.46□□□□□ -0.25
Col4a6B1AVK5 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.46□□□□□ -0.25
Col4a6B1AVK5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col4a6B1AVK5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col4a6B1AVK5 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Col4a6B1AVK5 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col4a6B1AVK5 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col4a6B1AVK5 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col4a6B1AVK5 Mir1943-201ENSMUST00000158276 73 ntBASIC13.46□□□□□ -0.26
Col4a6B1AVK5 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.46□□□□□ -0.26
Col4a6B1AVK5 Gm20426-201ENSMUST00000173657 440 ntBASIC13.46□□□□□ -0.26
Col4a6B1AVK5 Gm37835-201ENSMUST00000193305 361 ntBASIC13.46□□□□□ -0.26
Col4a6B1AVK5 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.46□□□□□ -0.26
Col4a6B1AVK5 Gm45925-201ENSMUST00000218882 744 ntBASIC13.46□□□□□ -0.26
Col4a6B1AVK5 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.46□□□□□ -0.26
Col4a6B1AVK5 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col4a6B1AVK5 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col4a6B1AVK5 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col4a6B1AVK5 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col4a6B1AVK5 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col4a6B1AVK5 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.46□□□□□ -0.26
Col4a6B1AVK5 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col4a6B1AVK5 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms