Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm12403-201ENSMUST00000121384 959 ntBASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm26464-201ENSMUST00000157094 305 ntBASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm19078-201ENSMUST00000206311 727 ntBASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lnp1A0A1B0GSK3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Mir6977-201ENSMUST00000184960 64 ntBASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm29608-201ENSMUST00000190444 463 ntBASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lnp1A0A1B0GSK3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms