Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm7222-201ENSMUST00000117512 906 ntBASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm15565-201ENSMUST00000118890 427 ntBASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Ighv8-14-201ENSMUST00000196781 358 ntBASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm13830-205ENSMUST00000201195 1155 ntBASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm27177-202ENSMUST00000183514 2703 ntBASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm44806-201ENSMUST00000205574 2303 ntBASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Igkv8-27A0A0G2JF28 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Klk2-ps-201ENSMUST00000205342 571 ntBASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gm18636-201ENSMUST00000218846 1066 ntBASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 AC149294.4-201ENSMUST00000227870 882 ntBASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 AC121598.1-201ENSMUST00000228224 1019 ntBASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 AC122860.2-201ENSMUST00000217967 2671 ntBASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 AC123834.1-201ENSMUST00000225346 2043 ntBASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Igkv8-27A0A0G2JF28 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms