Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Auts2-212ENSMUST00000178555 309 ntBASIC13.41□□□□□ -0.26
H2afb2S4R1M3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2afb2S4R1M3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Gm19220-201ENSMUST00000222682 803 ntBASIC13.4□□□□□ -0.26
H2afb2S4R1M3 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.4□□□□□ -0.26
H2afb2S4R1M3 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
H2afb2S4R1M3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
H2afb2S4R1M3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.39□□□□□ -0.27
H2afb2S4R1M3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Syt7-205ENSMUST00000224135 1557 ntBASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H2afb2S4R1M3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb2S4R1M3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms