Protein–RNA interactions for Protein: Q9Z321

Top3b, DNA topoisomerase 3-beta-1, mousemouse

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top3bQ9Z321 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Top3bQ9Z321 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Top3bQ9Z321 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Top3bQ9Z321 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Top3bQ9Z321 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Top3bQ9Z321 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Top3bQ9Z321 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Top3bQ9Z321 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.08□□□□□ -0.15
Top3bQ9Z321 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Gm10275-202ENSMUST00000168697 495 ntBASIC14.08□□□□□ -0.16
Top3bQ9Z321 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Gm37008-201ENSMUST00000195712 319 ntBASIC14.08□□□□□ -0.16
Top3bQ9Z321 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.08□□□□□ -0.16
Top3bQ9Z321 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.08□□□□□ -0.16
Top3bQ9Z321 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.08□□□□□ -0.16
Top3bQ9Z321 Gm10275-201ENSMUST00000092620 635 ntBASIC14.08□□□□□ -0.16
Top3bQ9Z321 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.08□□□□□ -0.16
Top3bQ9Z321 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.08□□□□□ -0.16
Top3bQ9Z321 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Top3bQ9Z321 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.08□□□□□ -0.16
Top3bQ9Z321 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.08□□□□□ -0.16
Top3bQ9Z321 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Top3bQ9Z321 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.07□□□□□ -0.16
Top3bQ9Z321 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Gm37259-201ENSMUST00000193903 849 ntBASIC14.07□□□□□ -0.16
Top3bQ9Z321 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Gm45865-201ENSMUST00000211815 945 ntBASIC14.07□□□□□ -0.16
Top3bQ9Z321 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.07□□□□□ -0.16
Top3bQ9Z321 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.07□□□□□ -0.16
Top3bQ9Z321 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Top3bQ9Z321 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Top3bQ9Z321 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Top3bQ9Z321 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Gm13612-201ENSMUST00000119276 390 ntBASIC14.06□□□□□ -0.16
Top3bQ9Z321 Gm11803-201ENSMUST00000119966 444 ntBASIC14.06□□□□□ -0.16
Top3bQ9Z321 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Gm15376-201ENSMUST00000122258 783 ntBASIC14.06□□□□□ -0.16
Top3bQ9Z321 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Gm2383-201ENSMUST00000181461 807 ntBASIC14.06□□□□□ -0.16
Top3bQ9Z321 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Top3bQ9Z321 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms