Protein–RNA interactions for Protein: Q9WU22

Ptpn4, Tyrosine-protein phosphatase non-receptor type 4, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn4Q9WU22 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ptpn4Q9WU22 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Gm13616-201ENSMUST00000120600 222 ntBASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ptpn4Q9WU22 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Gm6973-201ENSMUST00000117080 721 ntBASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Gm11543-201ENSMUST00000120758 370 ntBASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Gm18737-201ENSMUST00000173594 937 ntBASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Auts2-212ENSMUST00000178555 309 ntBASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Mir6956-201ENSMUST00000183598 62 ntBASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ptpn4Q9WU22 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms