Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Gm7653-201ENSMUST00000214567 508 ntBASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Upk3aQ9JKX8 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Gm14350-201ENSMUST00000116642 640 ntBASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Gm15806-201ENSMUST00000120696 955 ntBASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Gm9002-201ENSMUST00000178437 499 ntBASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Gm6244-201ENSMUST00000178732 841 ntBASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.88□□□□□ -0.35
Upk3aQ9JKX8 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Gm38671-201ENSMUST00000200573 130 ntBASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Upk3aQ9JKX8 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms