Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim39Q9ESN2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Gm33320-201ENSMUST00000192232 530 ntBASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Gm37714-201ENSMUST00000194742 342 ntBASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Gm44344-201ENSMUST00000200287 129 ntBASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim39Q9ESN2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Gm14767-201ENSMUST00000121559 586 ntBASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Mir6956-201ENSMUST00000183598 62 ntBASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Gm9229-201ENSMUST00000222777 126 ntBASIC12.56□□□□□ -0.4
Trim39Q9ESN2 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim39Q9ESN2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms