Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Gm27301-201ENSMUST00000184012 127 ntBASIC12.86□□□□□ -0.35
Ube4bQ9ES00 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ube4bQ9ES00 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.85□□□□□ -0.35
Ube4bQ9ES00 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.85□□□□□ -0.35
Ube4bQ9ES00 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ube4bQ9ES00 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.85□□□□□ -0.35
Ube4bQ9ES00 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.85□□□□□ -0.35
Ube4bQ9ES00 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Gm5364-201ENSMUST00000216789 889 ntBASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ube4bQ9ES00 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ube4bQ9ES00 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ube4bQ9ES00 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms