Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.58□□□□□ -0.4
Rtp4Q9ER80 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rtp4Q9ER80 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rtp4Q9ER80 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Gm43930-201ENSMUST00000203868 845 ntBASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rtp4Q9ER80 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Gm15376-201ENSMUST00000122258 783 ntBASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Gm27892-201ENSMUST00000185017 106 ntBASIC12.56□□□□□ -0.4
Rtp4Q9ER80 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Gm19078-201ENSMUST00000206311 727 ntBASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Gm44719-201ENSMUST00000206404 149 ntBASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rtp4Q9ER80 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rtp4Q9ER80 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rtp4Q9ER80 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rtp4Q9ER80 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rtp4Q9ER80 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rtp4Q9ER80 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.55□□□□□ -0.4
Rtp4Q9ER80 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms