Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Gm28760-201ENSMUST00000185995 736 ntBASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Gm19078-201ENSMUST00000206311 727 ntBASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Gm44872-201ENSMUST00000207864 420 ntBASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Gm5161-201ENSMUST00000075243 853 ntBASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Gm24447-201ENSMUST00000083977 338 ntBASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cpne8Q9DC53 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Gm16215-201ENSMUST00000161990 637 ntBASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.97□□□□□ -0.17
Cpne8Q9DC53 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cpne8Q9DC53 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Mir7023-201ENSMUST00000185093 64 ntBASIC13.96□□□□□ -0.17
Cpne8Q9DC53 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpne8Q9DC53 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cpne8Q9DC53 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cpne8Q9DC53 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cpne8Q9DC53 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cpne8Q9DC53 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cpne8Q9DC53 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpne8Q9DC53 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpne8Q9DC53 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cpne8Q9DC53 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpne8Q9DC53 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpne8Q9DC53 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpne8Q9DC53 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cpne8Q9DC53 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpne8Q9DC53 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cpne8Q9DC53 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpne8Q9DC53 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms