Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp8Q9DB85 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.11□□□□□ -0.31
Rrp8Q9DB85 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Gm16570-201ENSMUST00000161951 436 ntBASIC13.1□□□□□ -0.31
Rrp8Q9DB85 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Gm18827-201ENSMUST00000188341 790 ntBASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.1□□□□□ -0.31
Rrp8Q9DB85 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp8Q9DB85 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Gm15370-201ENSMUST00000117158 253 ntBASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Gm15808-201ENSMUST00000119046 604 ntBASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Gm14381-201ENSMUST00000122105 414 ntBASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Gm2991-201ENSMUST00000173338 480 ntBASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Mir3102-201ENSMUST00000175555 104 ntBASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.09□□□□□ -0.31
Rrp8Q9DB85 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp8Q9DB85 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms